Publications

Recent publications

See Full list on Google Scholar.

• Label-free optical biomarker for prostate cancer diagnosis Shagufta Rehman Alam, Karsten Siller, Robert Dreicer, Ammasi Periasamy Molecular Medicine (2026)
• Ten quick tips to SNIFF out sustainable and secure scientific software VP Nagraj, Karsten H Siller, Thomas Stewart, Neal Magee, Stephen D Turner PLOS Computational Biology, 22(7), e1014510 (2026)
• Chromokinesin Klp-19 regulates microtubule overlap and dynamics during anaphase in C. elegans Vitaly Zimyanin, Magdalena Magaj, Nadia Ingabire Manzi, Che-Hang Yu, Theresa Gibney, Yu-Zen Chen, Mustafa Basaran, Xavier Horton, Karsten Siller, Ariel Pani, Daniel Needleman, Daniel J Dickinson, Stefanie Redemann Journal of Cell Science, jcs.264066 (2026)
• Measuring metabolic changes in cancer cells using two‐photon fluorescence lifetime imaging microscopy and machine‐learning analysis Jiaxin Zhang, Horst Wallrabe, Karsten Siller, Brian Mbogo, Thomas Cassidy, Shagufta Rehman Alam, Ammasi Periasamy Journal of Biophotonics, 18(1), e202400426 (2025)
• HPC Container Management at the University of Virginia Ruoshi Sun, Karsten Siller Practice and Experience in Advanced Research Computing (PEARC ’24), 1–4 (2024)
• Using 3D large scale tomography to study force generation in the mitotic spindle Vitaly Zimyanin, Magdalena Magaj, Che-Hang Yu, Theresa Gibney, Basaran Mustafa, Xavier Horton, Karsten Siller, Louis Cueff, Hélène Bouvrais, Jacques Pécréaux, Daniel Needleman, Stefanie Redemann Microscopy and Microanalysis, 30(Supplement_1), ozae044.344 (2024)

Selected earlier work (before 2024)

• Segmented cell analyses to measure redox states of autofluorescent NAD (P) H, FAD & Trp in cancer cells by FLIM Horst Wallrabe, Zdenek Svindrych, Shagufta R Alam, Karsten H Siller, Tianxiong Wang, David Kashatus, Song Hu, Ammasi Periasamy Scientific Reports, 8(1), 79 (2018)
• Spindle orientation during asymmetric cell division Karsten H Siller, Chris Q Doe Nature Cell Biology, 11(4), 365–374 (2009)
• Lis1/dynactin regulates metaphase spindle orientation in Drosophila neuroblasts Karsten H Siller, Chris Q Doe Developmental Biology, 319(1), 1–9 (2008)
• Gαi generates multiple Pins activation states to link cortical polarity and spindle orientation in Drosophila neuroblasts Rick W Nipper, Karsten H Siller, Nicholas R Smith, Chris Q Doe, Kenneth E Prehoda Proceedings of the National Academy of Sciences, 104(36), 14306–14311 (2007)
• The NuMA-related Mud protein binds Pins and regulates spindle orientation in Drosophila neuroblasts Karsten H Siller, Clemens Cabernard, Chris Q Doe Nature Cell Biology, 8(6), 594–600 (2006)
• Live Imaging of Drosophila Brain Neuroblasts Reveals a Role for Lis1/Dynactin in Spindle Assembly and Mitotic Checkpoint Control Karsten H Siller, Madeline Serr, Ruth Steward, Tom S Hays, Chris Q Doe Molecular Biology of the Cell, 16(11), 5127–5140 (2005)